CDS

Accession Number TCMCG057C20556
gbkey CDS
Protein Id XP_018485058.1
Location join(39213913..39214092,39214186..39214371,39214496..39214608,39214695..39214878,39215188..39215285,39215762..39215969,39216058..39216315,39217149..39217388)
Gene LOC108855681
GeneID 108855681
Organism Raphanus sativus

Protein

Length 488aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018629556.1
Definition PREDICTED: auxin transporter protein 1-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category E
Description amino acid transmembrane transporter auxin binding auxin influx transmembrane transporter transporter
KEGG_TC 2.A.18.1
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K13946        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04075        [VIEW IN KEGG]
map04075        [VIEW IN KEGG]
GOs GO:0001736        [VIEW IN EMBL-EBI]
GO:0001738        [VIEW IN EMBL-EBI]
GO:0002009        [VIEW IN EMBL-EBI]
GO:0003333        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005342        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006811        [VIEW IN EMBL-EBI]
GO:0006820        [VIEW IN EMBL-EBI]
GO:0006865        [VIEW IN EMBL-EBI]
GO:0007164        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008509        [VIEW IN EMBL-EBI]
GO:0008514        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009624        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009914        [VIEW IN EMBL-EBI]
GO:0009926        [VIEW IN EMBL-EBI]
GO:0009958        [VIEW IN EMBL-EBI]
GO:0009986        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010011        [VIEW IN EMBL-EBI]
GO:0010015        [VIEW IN EMBL-EBI]
GO:0010053        [VIEW IN EMBL-EBI]
GO:0010054        [VIEW IN EMBL-EBI]
GO:0010101        [VIEW IN EMBL-EBI]
GO:0010102        [VIEW IN EMBL-EBI]
GO:0010311        [VIEW IN EMBL-EBI]
GO:0010328        [VIEW IN EMBL-EBI]
GO:0010817        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015075        [VIEW IN EMBL-EBI]
GO:0015171        [VIEW IN EMBL-EBI]
GO:0015318        [VIEW IN EMBL-EBI]
GO:0015711        [VIEW IN EMBL-EBI]
GO:0015849        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0021700        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0022857        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034220        [VIEW IN EMBL-EBI]
GO:0042562        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046942        [VIEW IN EMBL-EBI]
GO:0046943        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048469        [VIEW IN EMBL-EBI]
GO:0048527        [VIEW IN EMBL-EBI]
GO:0048528        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048729        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048764        [VIEW IN EMBL-EBI]
GO:0048765        [VIEW IN EMBL-EBI]
GO:0048829        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0060429        [VIEW IN EMBL-EBI]
GO:0060918        [VIEW IN EMBL-EBI]
GO:0060919        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071695        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0080161        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0090627        [VIEW IN EMBL-EBI]
GO:0090696        [VIEW IN EMBL-EBI]
GO:0090697        [VIEW IN EMBL-EBI]
GO:0090698        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098656        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1903825        [VIEW IN EMBL-EBI]
GO:1905039        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]
GO:1905393        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGGCGGGAGAAGAAGCAATAGTAGCTAGCGGAAATGACCACGACGGAGATCAGAATAACGGTAATCACACCGGAAAAACCGAAGAATACGACCCCTCCACCGGTTCTGCTCTAAGCAACTTTCTCTGGCACGGTGGCTCTGTCTGGGACGCTTGGTTCAGCTGCGCATCTAACCAGGTGGCGCAAGTGCTTCTGACACTACCGTACTCGTTCAGTCAACTAGGGATGTTATCAGGAATAGTACTTCAGATCTTTTACGGCTTACTCGGAAGCTGGACTGCTTACCTCATCAGTGTTCTCTACGTTGAGTATCGAGCTCGTAAGGAGAAAGAAGGCAAAAACTTCAAAAACCACGTTATTCAGTGGTTCGAAGTACTCGATGGGTTACTCGGCACATACTGGAAAGCAGTAGGCCTCGCATTTAACTGCACTTTCCTCTTGTTTGGATCTGTAATCCAACTCATTGCTTGTGCCAGTAACATTTATTACATAAACGATCACTTGGACAAGAGAACATGGACTTACATATTCGGCGCGTGTTGTGCAACCACTGTCTTTATACCGTCGTTCCATAATTATCGAATCTGGTCATTCCTCGGCTTGGGTATGACCACCTACACGGCATGGTACTTGGCCATCGCCTCCATTATCCACGGCCAGACGGAAGGTGTGAAGCACACTGGTCCAACAAAGCTAGTGCTTTATTTTACGGGAGCTACCAATATCTTGTATACCTTTGGTGGTCACGCAGTTACTGTTGAGATAATGCATGCAATGTGGAAACCACAGAAGTTTAAGTACATTTACTTGATGGCGACGTTATACGTTTTCACACTAACGATTCCGTCAGCTTCCGCCGTTTACTGGGCCTTCGGAGACGCACTTCTCAACCACTCTAATGCTTTTTCTCTTCTCCCCAAGAACGGGTGGCGTGACGCTGCCGTTATCCTCATGCTCATTCACCAATTTATAACGTTTGGATTCGCGTGTACCCCGCTCTACTTTGTGTGGGAGAAAGTGATAGGGATGCATGACACAAAAAGCATTTTCTTGAGGGCTTTAGCTCGATTGCCTGTGGTTATACCGATATGGTTCTTAGCTATTATCTTCCCGTTCTTTGGTCCGATCAATTCAGCGGTTGGTGCTCTTCTGGTTAGCTTCACCGTCTATATCATCCCGTCCCTTGCTCACATGCTCACTTACCGATCTGCCTCAGCTCGTCAGAATGCGGCGGAAAAGCCACCGTTCTTCATGCCAAGCTGGACGGCGATGTACGTGTTGAATGCTTTCGTGGTGATATGGGTTCTAATAGTCGGATTCGGGTTTGGTGGATGGGCAAGTGTAACCAACTTTGTTCGTCAAGTCGATACTTTTGGTCTCTTTGCTAAGTGTTACCAATGTAAATCACCGGTTCCAGCTGCCGCCACTCATGCTCCGGTCTCTGCTTTACACCACCGCCTTTGA
Protein:  
MSAGEEAIVASGNDHDGDQNNGNHTGKTEEYDPSTGSALSNFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIVLQIFYGLLGSWTAYLISVLYVEYRARKEKEGKNFKNHVIQWFEVLDGLLGTYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIASIIHGQTEGVKHTGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLMATLYVFTLTIPSASAVYWAFGDALLNHSNAFSLLPKNGWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSIFLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRSASARQNAAEKPPFFMPSWTAMYVLNAFVVIWVLIVGFGFGGWASVTNFVRQVDTFGLFAKCYQCKSPVPAAATHAPVSALHHRL